Globally, arid and semi-arid agricultural land is characterized by low soil organic carbon (SOC) content. This impacts on the abundance and diversity of soil microorganisms in such environments. We therefore examined SOC and bacterial community structure dynamics in the single plots of the conventional (PC), improved fertilization (PA) and unimproved control (PT) at El Hmadna experimental station (Northwest Algeria) during five-time intervals T(0), T(15), T(70), T(104) and T(147 days). The SOC content was determined using the modified Walkley and Black method. The 16S rRNA genes were isolated from soils and sequenced using the Illumina sequencing platform. Over time, OC levels increased by more than 15%, especially in the improved plot. The highest OC stock was observed for the unmanaged control plot (47 Mg ha-1), also associated with higher bacterial biomass. However, taxonomic analysis revealed that bacterial diversity was higher in PA and PC, with Actinobacteria (42%) and Firmicutes (15%) dominating. Soil salinity did negatively influence SOC but the imposed management practices such as organic amendments did improve both carbon retention and bacterial diversity. The results underline the importance of imposing sustainable agricultural practices to improve carbon sequestration and soil health in semi-arid regions.