兰州大学循证社会科学交叉创新实验室 Innovation Laboratory of Evidence-based Social Sciences,Lanzhou University

Sepsis prediction, early detection, and identification using clinical text for machine learning: A systematic review

2022-01

OBJECTIVE: To determine the effects of using unstructured clinical text in machine learning (ML) for prediction, early detection, and identification of sepsis. MATERIALS AND METHODS: PubMed, Scopus, ACM DL, dblp, and IEEE Xplore databases were searched. Articles utilizing clinical text for ML or natural language processing (NLP) to detect, identify, recognize, diagnose, or predict the onset, development, progress, or prognosis of systemic inflammatory response syndrome, sepsis, severe sepsis, or septic shock were included. Sepsis definition, dataset, types of data, ML models, NLP techniques, and evaluation metrics were extracted. RESULTS: The clinical text used in models include narrative notes written by nurses, physicians, and specialists in varying situations. This is often combined with common structured data such as demographics, vital signs, laboratory data, and medications. Area under the receiver operating characteristic curve (AUC) comparison of ML methods showed that utilizing both text and structured data predicts sepsis earlier and more accurately than structured data alone. No meta-analysis was performed because of incomparable measurements among the 9 included studies. DISCUSSION: Studies focused on sepsis identification or early detection before onset; no studies used patient histories beyond the current episode of care to predict sepsis. Sepsis definition affects reporting methods, outcomes, and results. Many methods rely on continuous vital sign measurements in intensive care, making them not easily transferable to general ward units. CONCLUSIONS: Approaches were heterogeneous, but studies showed that utilizing both unstructured text and structured data in ML can improve identification and early detection of sepsis.

研究类型
系统评价
人群
混合人群
主题
["技术资源","医疗服务能力"]
作者
Melissa Y Yan;Lise Tuset Gustad;Øystein Nytrø
国家
Norway
关键词
electronic health records; machine learning; natural language processing; sepsis; systematic review.
来源期刊
J Am Med Inform Assoc .
发布日期
2022-01
相关网址
https://www.healthsystemsevidence.org/articles/62fe6fb9ef088708d8e02f6c-sepsis-prediction-early-detection-and-identification-using-clinical-text-for-machine-learning-a-systematic-review?source=saved_email
DOI
10.1093/jamia/ocab236
学科领域
SectorsSpecialty care